Version 5.4
Homo sapiens Gene: RBM12
Summary
InnateDB Gene IDBG-402146.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBM12
Gene Name RNA binding motif protein 12
Synonyms HRIHFB2091; SWAN
Species Homo sapiens
Ensembl Gene ENSG00000244462
Encoded Proteins
IDBP-70591
RNA binding motif protein 12
IDBP-70593
RNA binding motif protein 12
IDBP-70595
RNA binding motif protein 12
IDBP-373707
RNA binding motif protein 12
IDBP-373711
RNA binding motif protein 12
IDBP-373713
RNA binding motif protein 12
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein that contains several RNA-binding motifs, potential transmembrane domains, and proline-rich regions. This gene and the gene for copine I overlap at map location 20q11.21. Alternative splicing in the 5' UTR results in four transcript variants. All variants encode the same protein. [provided by RefSeq, Nov 2010]
This gene encodes a protein that contains several RNA-binding motifs, potential transmembrane domains, and proline-rich regions. This gene and the gene for copine I overlap at map location 20q11.21. Alternative splicing in the 5\' UTR results in four transcript variants. All variants encode the same protein. [provided by RefSeq, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 20:35648925-35664956
Strand Reverse strand
Band q11.22
Transcripts
ENST00000374114 ENSP00000363228
ENST00000359646 ENSP00000352668
ENST00000374104 ENSP00000363217
ENST00000424458 ENSP00000411036
ENST00000431148 ENSP00000392642
ENST00000435161 ENSP00000411692
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 15 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000089824
View Gene Order
ENSBTAG00000044015
Not yet available
Cross-References
SwissProt Q9NTZ6
TrEMBL A6PVI0 A6PVI1 Q5JX62 Q69YJ7
UniProt Splice Variant
Entrez Gene 10137
UniGene Hs.700188 Hs.700345 Hs.740926
RefSeq NM_001198840 NM_001198838 NM_006047 NM_152838
HUGO HGNC:9898
OMIM 607179
CCDS CCDS13261
HPRD 06212
IMGT
EMBL AB015336 AB018308 AF345332 AF345335 AF393214 AJ289772 AK092239 AL109827 AL833222 AL834472 BC012787 BC013981 CH471077
GenPept AAH12787 AAH13981 AAL83752 AAL83755 AAM73682 BAA34485 BAA34794 BAG52504 CAB87611 CAC20441 CAD39131 CAH10603 EAW76182 EAW76184 EAW76188
RNA Seq Atlas 10137

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca