Version 5.4
Homo sapiens Gene: TRIM39-RPP21
Summary
InnateDB Gene IDBG-402438.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM39-RPP21
Gene Name TRIM39-RPP21 readthrough
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000248167
Encoded Proteins
IDBP-480801
TRIM39-RPP21 readthrough
IDBP-810774
TRIM39-RPP21 readthrough
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This locus represents naturally occurring read-through transcription between the neighboring TRIM39 (tripartite motif-containing 39) and RPP21 (ribonuclease P/MRP 21kDa subunit) genes on chromosome 6. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:30328907-30346858
Strand Forward strand
Band p22.1
Transcripts
ENST00000513556 ENSP00000424048
ENST00000623385 ENSP00000485378
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
Cellular Component
GO:0005622 intracellular
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL A2AAZ2 A2AAZ3 A2AAZ4 A2AAZ5 A2AAZ6 A6ZJ12
UniProt Splice Variant
Entrez Gene 202658
UniGene
RefSeq NM_001199119
HUGO HGNC:38845
OMIM
CCDS
HPRD
IMGT
EMBL AL662795 EU012025
GenPept ABR92635
RNA Seq Atlas 202658

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca