Version 5.4
Homo sapiens Gene: TIGD4
Summary
InnateDB Gene IDBG-41495.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TIGD4
Gene Name tigger transposable element derived 4
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000169989
Encoded Proteins
IDBP-41497
tigger transposable element derived 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene belongs to the tigger subfamily of the pogo superfamily of DNA-mediated transposons in humans. These proteins are related to DNA transposons found in fungi and nematodes, and more distantly to the Tc1 and mariner transposases. They are also very similar to the major mammalian centromere protein B. The exact function of this gene is not known. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:152769354-152779764
Strand Reverse strand
Band q31.3
Transcripts
ENST00000304337 ENSP00000355162
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0000775 chromosome, centromeric region
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000047819
View Gene Order
ENSBTAG00000009161
Not yet available
Cross-References
SwissProt Q8IY51
TrEMBL
UniProt Splice Variant
Entrez Gene 201798
UniGene Hs.742236
RefSeq NM_145720 XM_005262807 XM_006714131
HUGO HGNC:18335
OMIM
CCDS CCDS34079
HPRD
IMGT
EMBL AC106882 AK058054 BC037869
GenPept AAH37869 BAB71642
RNA Seq Atlas 201798

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca