Version 5.4
Homo sapiens Gene: SHROOM1
Summary
InnateDB Gene IDBG-43358.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SHROOM1
Gene Name shroom family member 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000164403
Encoded Proteins
IDBP-43360
shroom family member 1
IDBP-43362
shroom family member 1
IDBP-43368
shroom family member 1
IDBP-376644
shroom family member 1
IDBP-813659
shroom family member 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary SHROOM family members play diverse roles in the development of the nervous system and other tissues (Hagens et al., 2006 [PubMed 16615870]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:132822141-132830898
Strand Reverse strand
Band q31.1
Transcripts
ENST00000378679 ENSP00000367950
ENST00000319854 ENSP00000324245
ENST00000378676 ENSP00000367947
ENST00000440118 ENSP00000388049
ENST00000488072
ENST00000495680
ENST00000606676
ENST00000617339 ENSP00000478436
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0051015 actin filament binding
Biological Process
GO:0000902 cell morphogenesis
GO:0051017 actin filament bundle assembly
Cellular Component
GO:0005737 cytoplasm
GO:0005874 microtubule
GO:0016460 myosin II complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000018387
View Gene Order
ENSBTAG00000014676
Not yet available
Cross-References
SwissProt Q2M3G4
TrEMBL C9JXU1
UniProt Splice Variant
Entrez Gene 134549
UniGene Hs.519574
RefSeq NM_001172700 XM_005271886 XM_005271887 XM_006714533 NM_133456 XM_005271885
HUGO HGNC:24084
OMIM 611179
CCDS CCDS54902 CCDS4161
HPRD 10655
IMGT
EMBL AB075840 AC004500 AC004775 AF314142 BC104914 BC104916 BC143494 CH471062
GenPept AAI04915 AAI04917 AAI43495 AAM15526 BAB85546 EAW62311 EAW62312
RNA Seq Atlas 134549

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca