Version 5.4
Homo sapiens Gene: LRRTM2
Summary
InnateDB Gene IDBG-47472.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRRTM2
Gene Name leucine rich repeat transmembrane neuronal 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000146006
Encoded Proteins
IDBP-47474
leucine rich repeat transmembrane neuronal 2
IDBP-475115
leucine rich repeat transmembrane neuronal 2
IDBP-473634
leucine rich repeat transmembrane neuronal 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 5:138868923-138875368
Strand Reverse strand
Band q31.2
Transcripts
ENST00000274711 ENSP00000274711
ENST00000521094 ENSP00000430902
ENST00000518785 ENSP00000428398
ENST00000523537
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042043 neurexin family protein binding
Biological Process
GO:0002091 negative regulation of receptor internalization
GO:0050808 synapse organization
GO:0060291 long-term synaptic potentiation
Cellular Component
GO:0016021 integral component of membrane
GO:0030054 cell junction
GO:0045211 postsynaptic membrane
GO:0060076 excitatory synapse
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000071862
View Gene Order
ENSBTAG00000014192
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.656653 Hs.678651
RefSeq NM_015564
HUGO
OMIM
CCDS CCDS47272
HPRD 17454
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca