Version 5.4
Homo sapiens Gene: ATG9B
Summary
InnateDB Gene IDBG-48239.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ATG9B
Gene Name autophagy related 9B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000181652
Encoded Proteins
IDBP-811374
autophagy related 9B
IDBP-811362
autophagy related 9B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene functions in the regulation of autophagy, a lysosomal degradation pathway. This gene also functions as an antisense transcript in the posttranscriptional regulation of the endothelial nitric oxide synthase 3 gene, which has 3' overlap with this gene on the opposite strand. Mutations in this gene and disruption of the autophagy process have been associated with multiple cancers. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:151012209-151024499
Strand Reverse strand
Band q36.1
Transcripts
ENST00000404733
ENST00000476282
ENST00000471797
ENST00000469530 ENSP00000479879
ENST00000473409
ENST00000473134
ENST00000466157
ENST00000605952 ENSP00000475737
ENST00000617967
ENST00000611177
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006914 autophagy
Cellular Component
GO:0000421 autophagic vacuole membrane
GO:0005737 cytoplasm
GO:0005776 autophagic vacuole
GO:0016021 integral component of membrane
GO:0031410 cytoplasmic vesicle
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.707300
RefSeq NM_173681
HUGO
OMIM
CCDS
HPRD 08253
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca