Version 5.4
Homo sapiens Gene: GPATCH8
Summary
InnateDB Gene IDBG-54074.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GPATCH8
Gene Name G patch domain containing 8
Synonyms GPATC8; KIAA0553
Species Homo sapiens
Ensembl Gene ENSG00000186566
Encoded Proteins
IDBP-759230
IDBP-758973
IDBP-764111
IDBP-758018
IDBP-759710
IDBP-759509
IDBP-761827
IDBP-764043
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:44395284-44503430
Strand Reverse strand
Band q21.31
Transcripts
ENST00000335500
ENST00000587228 ENSP00000468719
ENST00000586037 ENSP00000468821
ENST00000585614 ENSP00000465781
ENST00000592154 ENSP00000467873
ENST00000588554 ENSP00000465921
ENST00000591680 ENSP00000467556
ENST00000592746 ENSP00000464815
ENST00000586265
ENST00000590041 ENSP00000467233
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 12 experimentally validated interaction(s) in this database.
Experimentally validated
Total 12 [view]
Protein-Protein 12 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000034621
View Gene Order
ENSBTAG00000038316
Not yet available
Cross-References
SwissProt
TrEMBL K7EQK8
UniProt Splice Variant
Entrez Gene 23131
UniGene Hs.463129 Hs.623846
RefSeq NM_001002909 XM_006721781 XM_006721782 XM_006721783
HUGO HGNC:29066
OMIM 614396
CCDS CCDS32666
HPRD 11089
IMGT
EMBL AC007722 AC103703
GenPept
RNA Seq Atlas 23131

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca