Version 5.4
Homo sapiens Gene: CKAP4
Summary
InnateDB Gene IDBG-54744.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CKAP4
Gene Name cytoskeleton-associated protein 4
Synonyms CLIMP-63; ERGIC-63; p63
Species Homo sapiens
Ensembl Gene ENSG00000136026
Encoded Proteins
IDBP-54748
cytoskeleton-associated protein 4
IDBP-592618
cytoskeleton-associated protein 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:106237877-106304279
Strand Reverse strand
Band q23.3
Transcripts
ENST00000378026 ENSP00000367265
ENST00000552828
ENST00000553039 ENSP00000449240
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 33 experimentally validated interaction(s) in this database.
Experimentally validated
Total 33 [view]
Protein-Protein 33 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0004871 signal transducer activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0007165 signal transduction
GO:0032784 regulation of DNA-templated transcription, elongation
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005811 lipid particle
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0048471 perinuclear region of cytoplasm
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000046841
View Gene Order
ENSBTAG00000011913
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04141
Protein processing in endoplasmic reticulum pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL F8VVU0
UniProt Splice Variant
Entrez Gene 10970
UniGene Hs.712763 Hs.74368
RefSeq NM_006825
HUGO HGNC:16991
OMIM
CCDS CCDS9103
HPRD 16717
IMGT
EMBL AC079174
GenPept
RNA Seq Atlas 10970

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca