Version 5.4
Homo sapiens Gene: CLPTM1
Summary
InnateDB Gene IDBG-56971.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CLPTM1
Gene Name cleft lip and palate associated transmembrane protein 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000104853
Encoded Proteins
IDBP-56973
cleft lip and palate associated transmembrane protein 1
IDBP-595214
cleft lip and palate associated transmembrane protein 1
IDBP-597489
cleft lip and palate associated transmembrane protein 1
IDBP-764937
IDBP-765383
IDBP-763005
IDBP-764407
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:44954585-44993341
Strand Forward strand
Band q13.32
Transcripts
ENST00000337392 ENSP00000336994
ENST00000541297 ENSP00000442011
ENST00000546079 ENSP00000443192
ENST00000586975
ENST00000586915 ENSP00000468310
ENST00000589347 ENSP00000464985
ENST00000588274
ENST00000591304 ENSP00000467927
ENST00000587537
ENST00000589158
ENST00000588855
ENST00000585961 ENSP00000465731
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
Experimentally validated
Total 8 [view]
Protein-Protein 7 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007275 multicellular organismal development
GO:0030154 cell differentiation
GO:0033081 regulation of T cell differentiation in thymus
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0009897 external side of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000002981
View Gene Order
ENSBTAG00000020560
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.444441
RefSeq NM_001282175 NM_001282176 NM_001294
HUGO
OMIM
CCDS CCDS12651 CCDS74394 CCDS74395
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca