Version 5.4
Mus musculus Gene: Snrpe
Summary
InnateDB Gene IDBG-606611.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snrpe
Gene Name small nuclear ribonucleoprotein E
Synonyms AL022645; C76690; SME
Species Mus musculus
Ensembl Gene ENSMUSG00000090553
Encoded Proteins
IDBP-627226
small nuclear ribonucleoprotein E
IDBP-627227
small nuclear ribonucleoprotein E
IDBP-627228
small nuclear ribonucleoprotein E
IDBP-627229
small nuclear ribonucleoprotein E
IDBP-627231
small nuclear ribonucleoprotein E
IDBP-627235
small nuclear ribonucleoprotein E
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000182004:
Gene Information
Type Protein coding
Genomic Location Chromosome 1:133603871-133610291
Strand Reverse strand
Band E4
Transcripts
ENSMUST00000166915 ENSMUSP00000128400
ENSMUST00000166291 ENSMUSP00000132376
ENSMUST00000172079 ENSMUSP00000133244
ENSMUST00000164096 ENSMUSP00000127164
ENSMUST00000171264 ENSMUSP00000132543
ENSMUST00000164574 ENSMUSP00000131061
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 42 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 42 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0000387 spliceosomal snRNP assembly
GO:0000398 mRNA splicing, via spliceosome
GO:0042633 hair cycle
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005683 U7 snRNP
GO:0005685 U1 snRNP
GO:0005687 U4 snRNP
GO:0005689 U12-type spliceosomal complex
GO:0005829 cytosol
GO:0034709 methylosome
GO:0034715 pICln-Sm protein complex
GO:0034719 SMN-Sm protein complex
GO:0070062 extracellular vesicular exosome
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000182004
View Gene Order
Pathways
NETPATH
REACTOME
REACT_249110
mRNA Splicing pathway
REACT_215668
SLBP independent Processing of Histone Pre-mRNAs pathway
REACT_235610
mRNA Splicing - Minor Pathway pathway
REACT_248407
Processing of Capped Intronless Pre-mRNA pathway
REACT_224866
Metabolism of non-coding RNA pathway
REACT_257346
RNA Polymerase II Transcription Termination pathway
REACT_253727
Cleavage of Growing Transcript in the Termination Region pathway
REACT_206812
snRNP Assembly pathway
REACT_233572
Gene Expression pathway
REACT_235695
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs pathway
REACT_260226
mRNA Splicing - Major Pathway pathway
REACT_233950
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_242255
RNA Polymerase II Transcription pathway
KEGG
mmu03040
Spliceosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_11066
snRNP Assembly pathway
REACT_185
SLBP independent Processing of Histone Pre-mRNAs pathway
REACT_1364
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs pathway
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_1753
mRNA Splicing - Minor Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_387
Cleavage of Growing Transcript in the Termination Region pathway
REACT_894
RNA Polymerase II Transcription Termination pathway
REACT_1366
RNA Polymerase II Transcription pathway
REACT_11052
Metabolism of non-coding RNA pathway
REACT_1768
Processing of Capped Intronless Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_009227
OMIM
CCDS CCDS48364
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca