Version 5.4
Bos taurus Gene: SCOC
Summary
InnateDB Gene IDBG-629738.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCOC
Gene Name short coiled-coil protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000022109
Encoded Proteins
IDBP-681150
short coiled-coil protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000153130:
This gene encodes a short coiled-coiled domain-containing protein that localizes to the Golgi apparatus. The encoded protein interacts with ADP-ribosylation factor-like proteins. Pseudogenes of this gene are found on chromosomes 1 and 14. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:17627247-17639129
Strand Reverse strand
Band
Transcripts
ENSBTAT00000002066 ENSBTAP00000002066
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0016239 positive regulation of macroautophagy
Cellular Component
GO:0005768 endosome
GO:0005802 trans-Golgi network
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000153130
View Gene Order
ENSMUSG00000063253
View Gene Order
Cross-References
SwissProt
TrEMBL F1N686 Q2EGT4
UniProt Splice Variant
Entrez Gene 504257
UniGene Bt.22625
RefSeq NM_001191427 XM_005217538 XM_005217540 XM_005217541
HUGO HGNC:20335
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02044423 DQ381152
GenPept ABD04089
RNA Seq Atlas 504257

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca