Version 5.4
Bos taurus Gene: IFT20
Summary
InnateDB Gene IDBG-631552.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IFT20
Gene Name Intraflagellar transport protein 20 homolog
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000008110
Encoded Proteins
IDBP-683092
Intraflagellar transport protein 20 homolog
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000109083:
This gene encodes a intraflagellar transport protein important for intracellular transport. The encoded protein forms part of a complex involved in trafficking of proteins from the Golgi body, including recycling of immune signalling components (Finetti et al., PubMed: 19855387). This gene is part of a complex set of sense-antisense loci that may be co-regulated. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. A pseudogene of this gene is located on the long arm of chromosome 14.[provided by RefSeq, Jun 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 19:20372730-20379655
Strand Reverse strand
Band
Transcripts
ENSBTAT00000010668 ENSBTAP00000010668
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0002046 opsin binding
GO:0005515 protein binding
Biological Process
GO:0001822 kidney development
GO:0007224 smoothened signaling pathway
GO:0008542 visual learning
GO:0022008 neurogenesis
GO:0030030 cell projection organization
GO:0034067 protein localization to Golgi apparatus
GO:0035845 photoreceptor cell outer segment organization
GO:0036372 opsin transport
GO:0042384 cilium assembly
GO:0051642 centrosome localization
GO:0055007 cardiac muscle cell differentiation
GO:0060828 regulation of canonical Wnt signaling pathway
GO:0061351 neural precursor cell proliferation
GO:0061512 protein localization to cilium
GO:1902017 regulation of cilium assembly
GO:2000785 regulation of autophagic vacuole assembly
Cellular Component
GO:0001750 photoreceptor outer segment
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005813 centrosome
GO:0005814 centriole
GO:0005856 cytoskeleton
GO:0005929 cilium
GO:0030992 intraciliary transport particle B
GO:0031514 motile cilium
GO:0032391 photoreceptor connecting cilium
GO:0036064 ciliary basal body
GO:0042995 cell projection
GO:0044292 dendrite terminus
GO:0070062 extracellular vesicular exosome
GO:0072372 primary cilium
GO:0097546 ciliary base
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000109083
View Gene Order
ENSMUSG00000001105
View Gene Order
Cross-References
SwissProt Q58CS6
TrEMBL
UniProt Splice Variant
Entrez Gene 445364
UniGene Bt.1854
RefSeq NM_001013603 XM_005220070 XM_005220071
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC103453 BT021871
GenPept AAI03454 AAX46718
RNA Seq Atlas 445364

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca