Version 5.4
Homo sapiens Gene: SCAF1
Summary
InnateDB Gene IDBG-63168.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCAF1
Gene Name SR-related CTD-associated factor 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000126461
Encoded Proteins
IDBP-63170
SR-related CTD-associated factor 1
IDBP-765741
IDBP-764963
IDBP-763927
IDBP-809074
SR-related CTD-associated factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:49642125-49658642
Strand Forward strand
Band q13.33
Transcripts
ENST00000360565 ENSP00000353769
ENST00000595242 ENSP00000472276
ENST00000601038 ENSP00000472649
ENST00000598359 ENSP00000473210
ENST00000622360 ENSP00000484326
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0019904 protein domain specific binding
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038406
View Gene Order
ENSBTAG00000006612
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.103521
RefSeq NM_021228 XM_005259122
HUGO
OMIM
CCDS CCDS33074
HPRD 11604
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca