Version 5.4
Bos taurus Gene: GPC6
Summary
InnateDB Gene IDBG-632139.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GPC6
Gene Name glypican-6 precursor
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000040347
Encoded Proteins
IDBP-683734
glypican 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:68232526-68740385
Strand Forward strand
Band
Transcripts
ENSBTAT00000054389 ENSBTAP00000049917
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0043395 heparan sulfate proteoglycan binding
Biological Process
GO:0016477 cell migration
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005634 nucleus
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0031225 anchored component of membrane
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL A1L539
UniProt Splice Variant
Entrez Gene 536153
UniGene Bt.86698
RefSeq NM_001081730
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BT029826 DAAA02033984 DAAA02033985 DAAA02033986 DAAA02033987 DAAA02033988 DAAA02033989 DAAA02033990 DAAA02033991 DAAA02033992
GenPept ABM06088
RNA Seq Atlas 536153
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca