Version 5.4
Homo sapiens Gene: CCDC47
Summary
InnateDB Gene IDBG-63603.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CCDC47
Gene Name coiled-coil domain containing 47
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000108588
Encoded Proteins
IDBP-63605
coiled-coil domain containing 47
IDBP-294057
coiled-coil domain containing 47
IDBP-762719
IDBP-758218
IDBP-808042
coiled-coil domain containing 47
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:63745250-63776351
Strand Reverse strand
Band q23.3
Transcripts
ENST00000225726 ENSP00000225726
ENST00000403162 ENSP00000384888
ENST00000582331
ENST00000582252 ENSP00000463577
ENST00000580986 ENSP00000462202
ENST00000584112
ENST00000612558 ENSP00000482148
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 36 experimentally validated interaction(s) in this database.
Experimentally validated
Total 36 [view]
Protein-Protein 34 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001649 osteoblast differentiation
GO:0006983 ER overload response
GO:0009791 post-embryonic development
GO:0055074 calcium ion homeostasis
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000078622
View Gene Order
ENSBTAG00000011834
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.202011 Hs.602845
RefSeq NM_020198 XM_005257527
HUGO
OMIM
CCDS CCDS11643
HPRD 17041
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca