Homo sapiens Gene: SMARCD2 | |||||||||||||||||||||||
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Summary | |||||||||||||||||||||||
InnateDB Gene | IDBG-63787.6 | ||||||||||||||||||||||
Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||||||||||||||
Gene Symbol | SMARCD2 | ||||||||||||||||||||||
Gene Name | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | ||||||||||||||||||||||
Synonyms | BAF60B; CRACD2; Rsc6p | ||||||||||||||||||||||
Species | Homo sapiens | ||||||||||||||||||||||
Ensembl Gene | ENSG00000108604 | ||||||||||||||||||||||
Encoded Proteins |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
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Protein Structure | |||||||||||||||||||||||
Useful resources | Stemformatics EHFPI ImmGen | ||||||||||||||||||||||
Entrez Gene | |||||||||||||||||||||||
Summary |
The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and has sequence similarity to the yeast Swp73 protein. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
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Gene Information | |||||||||||||||||||||||
Type | Protein coding | ||||||||||||||||||||||
Genomic Location | Chromosome 17:63832081-63843065 | ||||||||||||||||||||||
Strand | Reverse strand | ||||||||||||||||||||||
Band | q23.3 | ||||||||||||||||||||||
Transcripts | |||||||||||||||||||||||
Interactions | |||||||||||||||||||||||
Number of Interactions |
This gene and/or its encoded proteins are associated with 41 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
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Gene Ontology | |||||||||||||||||||||||
Molecular Function |
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Biological Process |
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Cellular Component |
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Orthologs | |||||||||||||||||||||||
Species
Mus musculus
Bos taurus
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Gene ID
Gene Order
Not yet available
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Pathways | |||||||||||||||||||||||
NETPATH | |||||||||||||||||||||||
REACTOME |
Chromatin organization pathway
RMTs methylate histone arginines pathway
Chromatin modifying enzymes pathway
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KEGG | |||||||||||||||||||||||
INOH | |||||||||||||||||||||||
PID NCI | |||||||||||||||||||||||
Cross-References | |||||||||||||||||||||||
SwissProt | Q92925 | ||||||||||||||||||||||
TrEMBL | J3KMX2 J3KT18 | ||||||||||||||||||||||
UniProt Splice Variant | |||||||||||||||||||||||
Entrez Gene | 6603 | ||||||||||||||||||||||
UniGene | Hs.250581 Hs.638804 | ||||||||||||||||||||||
RefSeq | NM_001098426 XM_005257604 | ||||||||||||||||||||||
HUGO | HGNC:11107 | ||||||||||||||||||||||
OMIM | 601736 | ||||||||||||||||||||||
CCDS | CCDS45756 | ||||||||||||||||||||||
HPRD | 03439 | ||||||||||||||||||||||
IMGT | |||||||||||||||||||||||
EMBL | AC015651 AF113019 AK300939 AK303951 BC018953 BC142963 CH471109 U66618 | ||||||||||||||||||||||
GenPept | AAC50696 AAF20280 AAH18953 AAI42964 BAG62568 BAG64878 EAW94267 | ||||||||||||||||||||||
RNA Seq Atlas | 6603 | ||||||||||||||||||||||