InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Gene: SNX5

Summary

InnateDB Gene

IDBG-638752.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SNX5

Gene Name

Sorting nexin-5

Synonyms

Species

Bos taurus

Ensembl Gene

ENSBTAG00000003422

Encoded Proteins

IDBP-690863

Sorting nexin-5

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000089006:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein binds to fanconi anemia complementation group A protein, but its function is unknown. This gene results in two transcript variants encoding the same protein. [provided by RefSeq, Jul 2008]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 13:38519143-38543948

Strand

Reverse strand

Band

Transcripts

ENSBTAT00000039411

ENSBTAP00000039205

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 18 interaction(s) predicted by orthology.

Predicted by orthology
Total	18 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0008289	lipid binding
GO:0035091	phosphatidylinositol binding

Biological Process

GO:0006810	transport
GO:0006886	intracellular protein transport
GO:0006897	endocytosis
GO:0006907	pinocytosis
GO:0015031	protein transport

Cellular Component

GO:0001726	ruffle
GO:0001891	phagocytic cup
GO:0005737	cytoplasm
GO:0005768	endosome
GO:0005886	plasma membrane
GO:0016020	membrane
GO:0030659	cytoplasmic vesicle membrane
GO:0031234	extrinsic component of cytoplasmic side of plasma membrane
GO:0031313	extrinsic component of endosome membrane
GO:0031410	cytoplasmic vesicle
GO:0031901	early endosome membrane
GO:0042995	cell projection
GO:0070685	macropinocytic cup