Version 5.4
Bos taurus Gene: BT.59061
Summary
InnateDB Gene IDBG-645155.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.59061
Gene Name BRCA1-A complex subunit RAP80 isoform 2
Synonyms RAP80
Species Bos taurus
Ensembl Gene ENSBTAG00000001707
Encoded Proteins
IDBP-697846
ubiquitin interaction motif containing 1 isoform 2
IDBP-697848
ubiquitin interaction motif containing 1 isoform 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000087206:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:39718679-39856764
Strand Reverse strand
Band
Transcripts
ENSBTAT00000065067 ENSBTAP00000055437
ENSBTAT00000043808 ENSBTAP00000041351
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 60 interaction(s) predicted by orthology.
Predicted by orthology
Total 60 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042393 histone binding
GO:0046965 retinoid X receptor binding
GO:0070530 K63-linked polyubiquitin binding
Biological Process
GO:0006302 double-strand break repair
GO:0010212 response to ionizing radiation
GO:0031572 G2 DNA damage checkpoint
GO:0045739 positive regulation of DNA repair
GO:0045892 negative regulation of transcription, DNA-templated
GO:0070537 histone H2A K63-linked deubiquitination
Cellular Component
GO:0005634 nucleus
GO:0070531 BRCA1-A complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000087206
View Gene Order
ENSMUSG00000025878
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
atm_pathway
ATM pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.59061
RefSeq NM_001038061 NM_001113222 XM_005209128 XM_005209129 XM_005209132
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca