Version 5.4
Bos taurus Gene: PDCD7
Summary
InnateDB Gene IDBG-645326.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PDCD7
Gene Name programmed cell death protein 7
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000039658
Encoded Proteins
IDBP-698035
programmed cell death 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000090470:
This gene encodes a 59 kDa protein that is associated with the U11 small nuclear ribonucleoprotein (snRNP), which is a component of the minor U12-type spliceosome responsible for catalyzing pre-mRNA splicing of U12-type introns. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:12021448-12030315
Strand Reverse strand
Band
Transcripts
ENSBTAT00000054198 ENSBTAP00000049812
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0070234 positive regulation of T cell apoptotic process
GO:2001235 positive regulation of apoptotic signaling pathway
Cellular Component
GO:0005689 U12-type spliceosomal complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000090470
View Gene Order
ENSMUSG00000041837
View Gene Order
Cross-References
SwissProt
TrEMBL E1B9C4
UniProt Splice Variant
Entrez Gene 784973
UniGene Bt.17971
RefSeq NM_001205449
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02027857 DAAA02027858
GenPept
RNA Seq Atlas 784973
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca