Version 5.4
Homo sapiens Gene: ZSCAN5A
Summary
InnateDB Gene IDBG-71399.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZSCAN5A
Gene Name zinc finger and SCAN domain containing 5A
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000131848
Encoded Proteins
IDBP-247139
zinc finger and SCAN domain containing 5A
IDBP-761953
IDBP-765681
IDBP-759906
IDBP-765278
IDBP-765424
IDBP-765530
IDBP-763852
IDBP-761805
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:56219670-56368383
Strand Reverse strand
Band q13.43
Transcripts
ENST00000391713 ENSP00000375593
ENST00000592355 ENSP00000467238
ENST00000588442 ENSP00000468675
ENST00000592101
ENST00000591078
ENST00000587340 ENSP00000467631
ENST00000586031
ENST00000590675
ENST00000588955 ENSP00000468008
ENST00000587614
ENST00000592679 ENSP00000466830
ENST00000585670
ENST00000587075
ENST00000592509 ENSP00000468797
ENST00000589279
ENST00000593106 ENSP00000464936
ENST00000587492 ENSP00000466445
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.177688 Hs.733850
RefSeq NM_024303 XM_005259254 XM_006723376 XM_006723377
HUGO
OMIM
CCDS CCDS12941
HPRD 15900
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca