Version 5.4
Homo sapiens Gene: LRCH3
Summary
InnateDB Gene IDBG-71813.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRCH3
Gene Name leucine-rich repeats and calponin homology (CH) domain containing 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000186001
Encoded Proteins
IDBP-71815
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387276
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387280
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387282
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387284
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387285
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387286
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387289
leucine-rich repeats and calponin homology (CH) domain containing 3
IDBP-387291
leucine-rich repeats and calponin homology (CH) domain containing 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:197791226-197888436
Strand Forward strand
Band q29
Transcripts
ENST00000334859 ENSP00000334375
ENST00000443727 ENSP00000412975
ENST00000425562 ENSP00000393579
ENST00000414675 ENSP00000394965
ENST00000441090 ENSP00000394609
ENST00000438796 ENSP00000399751
ENST00000452660 ENSP00000395309
ENST00000433298 ENSP00000400164
ENST00000428136 ENSP00000394763
ENST00000493726
ENST00000494069
ENST00000461674
ENST00000481048
ENST00000466845
ENST00000471667
ENST00000483442
ENST00000473177
ENST00000466054
ENST00000476664
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 31 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 31 [view]
Protein-Protein 31 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005576 extracellular region
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000022801
View Gene Order
ENSBTAG00000032839
Not yet available
Cross-References
SwissProt Q96II8
TrEMBL B4E0T7 E9PD99 F5H3V2 F8WFB5 H7C0J8 H7C1G3
UniProt Splice Variant
Entrez Gene 84859
UniGene Hs.659335 Hs.732490 Hs.743497
RefSeq NM_032773 XM_005269362 XM_005269363 XM_005269365 XM_005269367 XM_006713791
HUGO HGNC:28637
OMIM
CCDS CCDS3330
HPRD
IMGT
EMBL AC055764 AC135893 AC144530 AK303521 AL137527 BC007504 BC010565
GenPept AAH07504 AAH10565 BAG64549 CAB70791
RNA Seq Atlas 102724891 84859

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca