Version 5.4
Homo sapiens Gene: ZSCAN18
Summary
InnateDB Gene IDBG-72983.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZSCAN18
Gene Name zinc finger and SCAN domain containing 18
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000121413
Encoded Proteins
IDBP-72985
zinc finger and SCAN domain containing 18
IDBP-385656
zinc finger and SCAN domain containing 18
IDBP-385657
zinc finger and SCAN domain containing 18
IDBP-764396
IDBP-763258
IDBP-761054
IDBP-761168
IDBP-761336
IDBP-765756
IDBP-760726
IDBP-765380
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:58083838-58118427
Strand Reverse strand
Band q13.43
Transcripts
ENST00000240727 ENSP00000240727
ENST00000433686 ENSP00000412253
ENST00000421612 ENSP00000392653
ENST00000600404 ENSP00000470123
ENST00000600897 ENSP00000473019
ENST00000601144 ENSP00000468934
ENST00000600318
ENST00000600845 ENSP00000472129
ENST00000594191
ENST00000598497
ENST00000595784
ENST00000601063 ENSP00000469201
ENST00000595944 ENSP00000471570
ENST00000594567
ENST00000595721 ENSP00000473134
ENST00000600522 ENSP00000470329
ENST00000596372
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
Experimentally validated
Total 11 [view]
Protein-Protein 10 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000070822
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.235390
RefSeq NM_001145542 NM_001145543 NM_001145544 NM_023926 XM_005259174 XM_006723335 XM_006723336
HUGO
OMIM
CCDS CCDS12971 CCDS46214 CCDS46215
HPRD 07802
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca