Version 5.4
Homo sapiens Gene: ALS2CR8
Summary
InnateDB Gene IDBG-78991.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ALS2CR8
Gene Name amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000138380
Encoded Proteins
IDBP-78993
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-293132
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388422
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388424
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388426
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388428
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388429
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388430
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388431
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388432
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388433
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388434
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388435
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388436
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388437
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388438
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388439
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388440
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
IDBP-388441
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:202912214-202987063
Strand Forward strand
Band q33.2
Transcripts
ENST00000320443 ENSP00000316224
ENST00000402905 ENSP00000384006
ENST00000414490 ENSP00000413296
ENST00000431787 ENSP00000395276
ENST00000444724 ENSP00000416812
ENST00000414857 ENSP00000391617
ENST00000422368 ENSP00000392274
ENST00000432024 ENSP00000413166
ENST00000441569 ENSP00000401918
ENST00000445120 ENSP00000408998
ENST00000430899 ENSP00000394298
ENST00000428585 ENSP00000396221
ENST00000414439 ENSP00000416160
ENST00000443740 ENSP00000387785
ENST00000447539 ENSP00000394990
ENST00000457031 ENSP00000414789
ENST00000434998 ENSP00000415948
ENST00000427712 ENSP00000409985
ENST00000438828 ENSP00000414644
ENST00000471271
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0035865 cellular response to potassium ion
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0061400 positive regulation of transcription from RNA polymerase II promoter in response to calcium ion
GO:0071277 cellular response to calcium ion
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026017
View Gene Order
ENSBTAG00000016000
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001104586 NM_001282910 NM_001282911 NM_001282912 NM_024744 XM_005246858 XM_005246859 XM_005246860 XM_005246863 XM_005246864 XM_006712757 XM_006712758 XM_006712759
HUGO
OMIM
CCDS CCDS42801 CCDS63091
HPRD 10464
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca