Version 5.4
Homo sapiens Gene: ZMAT1
Summary
InnateDB Gene IDBG-80000.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZMAT1
Gene Name zinc finger, matrin-type 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000166432
Encoded Proteins
IDBP-80004
zinc finger, matrin-type 1
IDBP-585549
zinc finger, matrin-type 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein containing Cys2-His2 (C2H2)-type zinc fingers, which are similar to those found in the nuclear matrix protein matrin 3. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome X:101882288-101932031
Strand Reverse strand
Band q22.1
Transcripts
ENST00000372782 ENSP00000361868
ENST00000458570
ENST00000494068
ENST00000488347
ENST00000490757
ENST00000540921 ENSP00000437529
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0008270 zinc ion binding
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
Biological Process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000052676
View Gene Order
ENSBTAG00000003601
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.496512 Hs.603314
RefSeq NM_001011657 XM_005262214 XM_006724711
HUGO
OMIM
CCDS CCDS35348
HPRD 10029
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca