Version 5.4
Homo sapiens Gene: LRRC47
Summary
InnateDB Gene IDBG-86879.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRRC47
Gene Name leucine rich repeat containing 47
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000130764
Encoded Proteins
IDBP-86881
leucine rich repeat containing 47
IDBP-722501
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:3778558-3796504
Strand Reverse strand
Band p36.32
Transcripts
ENST00000378251 ENSP00000367498
ENST00000462356
ENST00000479239 ENSP00000462103
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 24 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 24 [view]
Protein-Protein 23 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004826 phenylalanine-tRNA ligase activity
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0008152 metabolic process
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000029028
View Gene Order
ENSBTAG00000004738
Not yet available
Cross-References
SwissProt Q8N1G4
TrEMBL A0A024R4G1
UniProt Splice Variant
Entrez Gene 57470
UniGene Hs.268488 Hs.708224
RefSeq NM_020710
HUGO HGNC:29207
OMIM
CCDS CCDS51
HPRD 13837
IMGT
EMBL AB033011 AL365330 BC031301 CH471130
GenPept AAH31301 BAA86499 CAI42528 EAW71478 EAW71479
RNA Seq Atlas 57470

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca