Version 5.4
Homo sapiens Gene: FIBCD1
Summary
InnateDB Gene IDBG-89667.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol FIBCD1
Gene Name fibrinogen C domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000130720
Encoded Proteins
IDBP-89669
fibrinogen C domain containing 1
IDBP-89671
fibrinogen C domain containing 1
IDBP-382600
fibrinogen C domain containing 1
IDBP-382604
fibrinogen C domain containing 1
IDBP-382606
fibrinogen C domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary FIBCD1 is a conserved type II transmembrane endocytic receptor that binds chitin and is located primarily in the intestinal brush border (Schlosser et al., 2009 [PubMed 19710473]).[supplied by OMIM, Apr 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:130902438-130939286
Strand Reverse strand
Band q34.12
Transcripts
ENST00000372338 ENSP00000361413
ENST00000372337 ENSP00000361412
ENST00000448616 ENSP00000414501
ENST00000444139 ENSP00000395319
ENST00000451466 ENSP00000393894
ENST00000463475
ENST00000486250
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008061 chitin binding
GO:0046872 metal ion binding
Biological Process
Cellular Component
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026841
View Gene Order
ENSBTAG00000017982
Not yet available
Cross-References
SwissProt Q8N539
TrEMBL A3KFJ8 A7YSM1 C9J4X0 X6RDH7
UniProt Splice Variant
Entrez Gene 84929
UniGene Hs.133205
RefSeq NM_001145106 NM_032843
HUGO HGNC:25922
OMIM 613357
CCDS CCDS6937
HPRD
IMGT
EMBL AK027716 AL161733 AY358311 BC032953 BC112892
GenPept AAH32953 AAI12893 AAQ88678 BAB55319 CAM45760 CAM45761
RNA Seq Atlas 84929

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca