Version 5.4
Homo sapiens Gene: GTF3C5
Summary
InnateDB Gene IDBG-90554.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GTF3C5
Gene Name general transcription factor IIIC, polypeptide 5, 63kDa
Synonyms TFiiiC2-63; TFIIIC63; TFIIICepsilon
Species Homo sapiens
Ensembl Gene ENSG00000148308
Encoded Proteins
IDBP-90556
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-90558
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-90560
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-90562
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-383156
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-383160
general transcription factor IIIC, polypeptide 5, 63kDa
IDBP-383162
general transcription factor IIIC, polypeptide 5, 63kDa
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:133030675-133058503
Strand Forward strand
Band q34.13
Transcripts
ENST00000372108 ENSP00000361180
ENST00000372099 ENSP00000361171
ENST00000372097 ENSP00000361169
ENST00000342018 ENSP00000339530
ENST00000440319 ENSP00000389498
ENST00000439697 ENSP00000393207
ENST00000435745 ENSP00000397961
ENST00000485692
ENST00000461871
ENST00000489842
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 43 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 43 [view]
Protein-Protein 39 [view]
Protein-DNA 4 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006383 transcription from RNA polymerase III promoter
GO:0010467 gene expression
GO:0035914 skeletal muscle cell differentiation
GO:0042791 5S class rRNA transcription from RNA polymerase III type 1 promoter
GO:0042797 tRNA transcription from RNA polymerase III promoter
Cellular Component
GO:0000127 transcription factor TFIIIC complex
GO:0005654 nucleoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026816
View Gene Order
ENSBTAG00000021373
Not yet available
Pathways
NETPATH
REACTOME
REACT_22339
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_1036
RNA Polymerase III Transcription Initiation From Type 2 Promoter pathway
REACT_347
RNA Polymerase III Transcription Initiation From Type 1 Promoter pathway
REACT_281
RNA Polymerase III Transcription Initiation pathway
REACT_1371
RNA Polymerase III Transcription pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.495417
RefSeq NM_001122823 NM_001286709 NM_012087
HUGO
OMIM
CCDS CCDS48050 CCDS6958 CCDS75927
HPRD 16077
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca