Version 5.4
Homo sapiens Gene: SYNGR3
Summary
InnateDB Gene IDBG-9706.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SYNGR3
Gene Name synaptogyrin 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000127561
Encoded Proteins
IDBP-9708
synaptogyrin 3
IDBP-751202
IDBP-746096
IDBP-752003
IDBP-810725
synaptogyrin 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes an integral membrane protein. The exact function of this protein is unclear, but studies of a similar murine protein suggest that it is a synaptic vesicle protein that also interacts with the dopamine transporter. The gene product belongs to the synaptogyrin gene family. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:1989660-1994275
Strand Forward strand
Band p13.3
Transcripts
ENST00000248121 ENSP00000248121
ENST00000562045 ENSP00000455577
ENST00000564642
ENST00000568896 ENSP00000454756
ENST00000563869 ENSP00000455344
ENST00000618464 ENSP00000481324
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042169 SH2 domain binding
GO:0047485 protein N-terminus binding
Biological Process
GO:0021762 substantia nigra development
GO:0032411 positive regulation of transporter activity
Cellular Component
GO:0008021 synaptic vesicle
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030054 cell junction
GO:0031594 neuromuscular junction
GO:0045202 synapse
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.435277 Hs.687104
RefSeq NM_004209
HUGO
OMIM
CCDS CCDS10456
HPRD 06801
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca