Version 5.4
Mus musculus Protein: Kdm2a
Summary
InnateDB Protein IDBP-129528.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Kdm2a
Protein Name lysine (K)-specific demethylase 2A
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000076698
InnateDB Gene IDBG-129526 (Kdm2a)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0045322 unmethylated CpG binding
Biological Process
GO:0070544 histone H3-K36 demethylation
Cellular Component
GO:0000790 nuclear chromatin
Protein Structure and Domains
PDB ID MGI:1354736
InterPro IPR001810 F-box domain
IPR001965 Zinc finger, PHD-type
IPR002857 Zinc finger, CXXC-type
IPR003347 JmjC domain
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
PFAM PF00646
PF12937
PF13013
PF02008
PF02373
PF08007
PF00628
PRINTS
PIRSF
SMART SM00256
SM00249
SM00558
SM00367
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL F6YRW4
UniProt Splice Variant
Entrez Gene 225876
UniGene Mm.471215
RefSeq NP_001001984
MGI ID
MGI Symbol Kdm2a
OMIM
CCDS CCDS37886
HPRD
IMGT
EMBL AC140073 CH466612
GenPept EDL33045

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca