Version 5.4
Mus musculus Protein: Dcaf13
Summary
InnateDB Protein IDBP-136818.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Dcaf13
Protein Name DDB1 and CUL4 associated factor 13
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000022909
InnateDB Gene IDBG-136816 (Dcaf13)
Protein Structure
UniProt Annotation
Function Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex (By similarity). {ECO:0000250}.
Subcellular Localization Nucleus, nucleolus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
GO:0008150 biological_process
GO:0016567 protein ubiquitination
Cellular Component
GO:0005730 nucleolus
GO:0030529 ribonucleoprotein complex
GO:0080008 Cul4-RING E3 ubiquitin ligase complex
Protein Structure and Domains
PDB ID MGI:2684929
InterPro IPR001680 WD40 repeat
IPR007287 Sof1-like protein
IPR017986 WD40-repeat-containing domain
PFAM PF00400
PF04158
PRINTS
PIRSF
SMART SM00320
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q6PAC3
PhosphoSite PhosphoSite-Q6PAC3
TrEMBL
UniProt Splice Variant
Entrez Gene 223499
UniGene
RefSeq NP_941008
MGI ID
MGI Symbol Dcaf13
OMIM
CCDS CCDS37066
HPRD
IMGT
EMBL AC164883 AC165352 BC060375
GenPept AAH60375

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca