Mus musculus Protein: Jhdm1d
Summary
InnateDB Protein IDBP-137923.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Jhdm1d
Protein Name jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000002305
InnateDB Gene IDBG-137921 (Jhdm1d)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005506 iron ion binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0032454 histone demethylase activity (H3-K9 specific)
GO:0035064 methylated histone binding
GO:0035575 histone demethylase activity (H4-K20 specific)
GO:0051864 histone demethylase activity (H3-K36 specific)
GO:0071558 histone demethylase activity (H3-K27 specific)
Biological Process
GO:0006351 transcription, DNA-templated
GO:0030901 midbrain development
GO:0033169 histone H3-K9 demethylation
GO:0035574 histone H4-K20 demethylation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0055114 oxidation-reduction process
GO:0070544 histone H3-K36 demethylation
GO:0071557 histone H3-K27 demethylation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
Protein Structure and Domains
PDB ID MGI:2443388
InterPro IPR001965 Zinc finger, PHD-type
IPR003347 JmjC domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
PFAM PF02373
PF08007
PF00628
PRINTS
PIRSF
SMART SM00249
SM00558
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q3UWM4
PhosphoSite PhosphoSite-Q3UWM4
TrEMBL
UniProt Splice Variant
Entrez Gene 338523
UniGene Mm.470551
RefSeq NP_001028602
MGI ID
MGI Symbol Kdm7a
OMIM
CCDS CCDS51753
HPRD
IMGT
EMBL AK042327 AK042834 AK129429 AK136209 AK136238 BC007161 BC145848
GenPept AAH07161 AAI45849 BAC31226 BAC31377 BAC98239 BAE22876 BAE22890