Version 5.4
Mus musculus Protein: Mkrn1
Summary
InnateDB Protein IDBP-138369.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Mkrn1
Protein Name makorin, ring finger protein, 1
Synonyms RFP;
Species Mus musculus
Ensembl Protein ENSMUSP00000031985
InnateDB Gene IDBG-138367 (Mkrn1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000209 protein polyubiquitination
Cellular Component
Protein Structure and Domains
PDB ID MGI:1859353
InterPro IPR000571 Zinc finger, CCCH-type
IPR001841 Zinc finger, RING-type
IPR018957 Zinc finger, C3HC4 RING-type
PFAM PF00642
PF13639
PF14634
PF00097
PRINTS
PIRSF
SMART SM00356
SM00184
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q9DB86
UniProt Splice Variant
Entrez Gene 54484
UniGene Mm.408489
RefSeq NP_061280
MGI ID
MGI Symbol Mkrn1
OMIM
CCDS CCDS20022
HPRD
IMGT
EMBL AC153624 AK005137 AK077060 BC003329 CH466533
GenPept AAH03329 BAB23835 BAC36584 EDL13605 EDL13606

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca