InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Upf3b

Summary

InnateDB Protein

IDBP-138664.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Upf3b

Protein Name

UPF3 regulator of nonsense transcripts homolog B (yeast)

Synonyms

5730594O13Rik; AI317193; AW541158; RENT3B; UPF3X;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000075614

InnateDB Gene

IDBG-138662 (Upf3b)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 44 interaction(s) predicted by orthology.

Predicted by orthology
Total	44 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003729	mRNA binding
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0045727

positive regulation of translation

Cellular Component

GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0035145	exon-exon junction complex

Protein Structure and Domains

PDB ID

MGI:1915384

InterPro

IPR005120 Regulator of nonsense-mediated decay, UPF3

PFAM

PF03467

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-Q3ULL6

TrEMBL

Q9CS15

UniProt Splice Variant

Entrez Gene

68134

UniGene

Mm.421926

RefSeq

NP_080849

MGI ID

MGI Symbol

Upf3b

OMIM

CCDS

CCDS30068

HPRD

IMGT

EMBL

AK019989 AK145431 AK162222 AL451076 BC047049

GenPept

AAH47049 BAB31954 BAE26432 BAE36799