Version 5.4
Mus musculus Protein: Atg9b
Summary
InnateDB Protein IDBP-140684.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atg9b
Protein Name ATG9 autophagy related 9 homolog B (S. cerevisiae)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000051864
InnateDB Gene IDBG-140682 (Atg9b)
Protein Structure
UniProt Annotation
Function Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. {ECO:0000269PubMed:15755735}.
Subcellular Localization Cytoplasmic vesicle, autophagosome membrane {ECO:0000269PubMed:15755735}; Multi-pass membrane protein {ECO:0000269PubMed:15755735}.
Disease Associations
Tissue Specificity Expressed in heart, brain, and placenta and testis. {ECO:0000269PubMed:15234981, ECO:0000269PubMed:15755735}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006914 autophagy
Cellular Component
GO:0000421 autophagic vacuole membrane
GO:0005737 cytoplasm
GO:0005776 autophagic vacuole
GO:0016021 integral component of membrane
GO:0031410 cytoplasmic vesicle
Protein Structure and Domains
PDB ID MGI:2685420
InterPro IPR007241 Autophagy-related protein 9
PFAM PF04109
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q6EBV9
PhosphoSite PhosphoSite-Q6EBV9
TrEMBL
UniProt Splice Variant
Entrez Gene 213948
UniGene Mm.332252
RefSeq NP_001002897
MGI ID
MGI Symbol Atg9b
OMIM
CCDS CCDS39027
HPRD
IMGT
EMBL AC113055 AY495541 AY515312 AY515313 BK004021
GenPept AAS72555 AAS87213 AAS87214 DAA05202

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca