Version 5.4
Mus musculus Protein: Rbm27
Summary
InnateDB Protein IDBP-143065.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbm27
Protein Name RNA binding motif protein 27
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000041688
InnateDB Gene IDBG-143061 (Rbm27)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Cytoplasm {ECO:0000269PubMed:15741184}. Nucleus speckle {ECO:0000269PubMed:15741184}. Note=Incorporated into the nuclear speckles and to speckles proximal to the nuclear periphery. Also localizes to punctate structures in the cytoplasm termed cytospeckles.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003723 RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006397 mRNA processing
GO:0008150 biological_process
Cellular Component
GO:0005737 cytoplasm
GO:0016607 nuclear speck
Protein Structure and Domains
PDB ID MGI:2147194
InterPro IPR000571 Zinc finger, CCCH-type
IPR002483 PWI domain
PFAM PF00642
PF01480
PRINTS
PIRSF
SMART SM00356
SM00311
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q5SFM8
PhosphoSite PhosphoSite-Q5SFM8
TrEMBL
UniProt Splice Variant
Entrez Gene 225432
UniGene Mm.405791
RefSeq
MGI ID
MGI Symbol Rbm27
OMIM
CCDS
HPRD
IMGT
EMBL AC125110 AK042613 AK087759 AK129330 AY461716 BC054080
GenPept AAH54080 AAS19274 BAC31304 BAC39993 BAC98140

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca