Version 5.4
Mus musculus Protein: Snrnp48
Summary
InnateDB Protein IDBP-145851.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snrnp48
Protein Name small nuclear ribonucleoprotein 48 (U11/U12)
Synonyms 1110050F08Rik; 6530403A03Rik; C6orf151;
Species Mus musculus
Ensembl Protein ENSMUSP00000089230
InnateDB Gene IDBG-145849 (Snrnp48)
Protein Structure
UniProt Annotation
Function Likely involved in U12-type 5' splice site recognition. {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046872 metal ion binding
Biological Process
GO:0006397 mRNA processing
GO:0008150 biological_process
GO:0008380 RNA splicing
Cellular Component
GO:0005689 U12-type spliceosomal complex
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID MGI:1915047
InterPro IPR022776 TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
PFAM PF05253
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9D361
PhosphoSite PhosphoSite-Q9D361
TrEMBL
UniProt Splice Variant
Entrez Gene 67797
UniGene Mm.402407
RefSeq NP_080658
MGI ID
MGI Symbol Snrnp48
OMIM
CCDS CCDS36635
HPRD
IMGT
EMBL AK007431 AK012916 AK018315 AK087789 BC021443 BC037073
GenPept AAH21443 AAH37073 BAB25034 BAB28547 BAB31160 BAC40003

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca