Version 5.4
Mus musculus Protein: Arid4a
Summary
InnateDB Protein IDBP-146332.5
Last Modified 2012-02-14 [Report errors or provide feedback]
Gene Symbol Arid4a
Protein Name AT rich interactive domain 4A (RBP1-like)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000035512
InnateDB Gene IDBG-146330 (Arid4a)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 21 interaction(s) predicted by orthology.
Predicted by orthology
Total 21 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
GO:0006349 regulation of gene expression by genetic imprinting
GO:0034773 histone H4-K20 trimethylation
GO:0036124 histone H3-K9 trimethylation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0048821 erythrocyte development
GO:0080182 histone H3-K4 trimethylation
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0017053 transcriptional repressor complex
Protein Structure and Domains
PDB ID MGI:2444354
InterPro IPR000953 Chromo domain/shadow
IPR001606 ARID/BRIGHT DNA-binding domain
IPR002999 Tudor domain
IPR012603 RBB1NT
IPR016197 Chromo domain-like
IPR025995 RNA binding activity-knot of a chromodomain
PFAM PF01388
PF00567
PF08169
PF11717
PRINTS
PIRSF
SMART SM00298
SM00501
SM00333
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-NP_001074664
TrEMBL Q8CIT7
UniProt Splice Variant
Entrez Gene 238247
UniGene Mm.241601
RefSeq NP_001074664
MGI ID
MGI Symbol Arid4a
OMIM
CCDS CCDS36471
HPRD
IMGT
EMBL AC112794 AC132325 AK041444 AK042186 AK050594 AY116675 AY163235 AY163236 AY163237
GenPept AAN47197 AAN84615 AAN84616 AAN84617 BAC30948 BAC31192 BAC34332

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca