InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Lsm2

Summary

InnateDB Protein

IDBP-175387.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Lsm2

Protein Name

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Synonyms

D17H6S56E-2; D17H6S56E2; Dmapl; Dmpkap; G7b; Sm-X5; SmX5; snRNP;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000007266

InnateDB Gene

IDBG-175385 (Lsm2)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 45 interaction(s) predicted by orthology.

Experimentally validated
Total	1 [view]
Protein-Protein	1 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	45 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0019901	protein kinase binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0006397

mRNA processing

Cellular Component

GO:0071013

catalytic step 2 spliceosome

Protein Structure and Domains

PDB ID

MGI:90676

InterPro

IPR001163 Ribonucleoprotein LSM domain
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 Like-Sm (LSM) domain

PFAM

PF01423

PRINTS

PIRSF

SMART

SM00651

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

O35901

UniProt Splice Variant

Entrez Gene

27756

UniGene

Mm.415967

RefSeq

NP_085100

MGI ID

MGI Symbol

Lsm2

OMIM

CCDS

CCDS28671

HPRD

IMGT

EMBL

AC087117 AF109905 AF109906 AF204146 AF204147 AF204148 AF204149 AF204150 AF204151 AF204152 AF397035 AF397036 BC049543 CH466666 U85207

GenPept

AAB72038 AAC84150 AAC84171 AAG31423 AAG31424 AAG31425 AAG31426 AAG31427 AAG31428 AAG31429 AAH49543 AAL14449 AAL14457 EDL26703