Version 5.4
Mus musculus Protein: Thumpd3
Summary
InnateDB Protein IDBP-175603.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Thumpd3
Protein Name THUMP domain containing 3
Synonyms AW556087; Gt(ROSA)26asSor; Gtrosa26as;
Species Mus musculus
Ensembl Protein ENSMUSP00000032398
InnateDB Gene IDBG-175601 (Thumpd3)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity Ubiquitously expressed. {ECO:0000269PubMed:9108056}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003723 RNA binding
GO:0008168 methyltransferase activity
Biological Process
GO:0008150 biological_process
GO:0032259 methylation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID MGI:1277973
InterPro IPR000241 Putative RNA methylase domain
IPR004114 THUMP
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like
PFAM PF01170
PF02926
PRINTS
PIRSF
SMART SM00981
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P97770
PhosphoSite PhosphoSite-P97770
TrEMBL D3YYB2
UniProt Splice Variant
Entrez Gene 14911
UniGene Mm.781
RefSeq NP_032214
MGI ID
MGI Symbol Thumpd3
OMIM
CCDS CCDS20410
HPRD
IMGT
EMBL AC155722 AK017246 AK142140 BC002024 BC012688 BC046800 U83176
GenPept AAC60384 AAH02024 AAH12688 AAH46800 BAB30650 BAE24945

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca