Version 5.4
Mus musculus Protein: Trmt13
Summary
InnateDB Protein IDBP-190115.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trmt13
Protein Name coiled-coil domain containing 76
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000047320
InnateDB Gene IDBG-190113 (Trmt13)
Protein Structure
UniProt Annotation
Function tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His). {ECO:0000250}.
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0008168 methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0008033 tRNA processing
GO:0008150 biological_process
GO:0032259 methylation
Cellular Component
GO:0005575 cellular_component
Protein Structure and Domains
PDB ID MGI:1925219
InterPro IPR007871 Methyltransferase TRM13
IPR021721 Zinc finger, CCCH-type, TRM13
IPR022776 TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
PFAM PF05206
PF11722
PF05253
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8BYH3
PhosphoSite PhosphoSite-Q8BYH3
TrEMBL
UniProt Splice Variant
Entrez Gene 229780
UniGene Mm.259648
RefSeq NP_084292
MGI ID
MGI Symbol Trmt13
OMIM
CCDS CCDS38612
HPRD
IMGT
EMBL AK039588
GenPept BAC30394

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca