Version 5.4
Mus musculus Protein: Syf2
Summary
InnateDB Protein IDBP-196749.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Syf2
Protein Name SYF2 homolog, RNA splicing factor (S. cerevisiae)
Synonyms 1110018L13Rik; Cbpin; D4Bwg1551e; Gcipip; mp29; Ntc31; p29;
Species Mus musculus
Ensembl Protein ENSMUSP00000030622
InnateDB Gene IDBG-196747 (Syf2)
Protein Structure
UniProt Annotation
Function May be involved in pre-mRNA splicing. {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000269PubMed:12437976}.
Disease Associations
Tissue Specificity Abundantly expressed in the heart, liver and kidney. Expressed at lower level other tissues. {ECO:0000269PubMed:12437976}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001701 in utero embryonic development
GO:0006397 mRNA processing
GO:0007095 mitotic G2 DNA damage checkpoint
GO:0007369 gastrulation
GO:0008380 RNA splicing
GO:0048568 embryonic organ development
Cellular Component
GO:0005634 nucleus
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID MGI:1915842
InterPro IPR013260 mRNA splicing factor SYF2
PFAM PF08231
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9D198
PhosphoSite PhosphoSite-
TrEMBL
UniProt Splice Variant
Entrez Gene 68592
UniGene Mm.408599
RefSeq NP_081056
MGI ID
MGI Symbol Syf2
OMIM
CCDS CCDS18781
HPRD
IMGT
EMBL AK003787 AK152794 AY033432 AY155574 BC051484
GenPept AAH51484 AAK54459 AAO06147 BAB22995 BAE31500

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca