InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Srbd1

Summary

InnateDB Protein

IDBP-201065.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Srbd1

Protein Name

S1 RNA binding domain 1

Synonyms

AI461933; C85414; D530025C17Rik;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000092810

InnateDB Gene

IDBG-201063 (Srbd1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.

Experimentally validated
Total	1 [view]
Protein-Protein	0
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	8 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003674	molecular_function
GO:0003723	RNA binding
GO:0016788	hydrolase activity, acting on ester bonds

Biological Process

GO:0006139	nucleobase-containing compound metabolic process
GO:0008150	biological_process

Cellular Component

GO:0005575

cellular_component

Protein Structure and Domains

PDB ID

MGI:1925836

InterPro

IPR003029 Ribosomal protein S1, RNA-binding domain
IPR006641 YqgF/RNase H-like domain
IPR010994 RuvA domain 2-like
IPR012340 Nucleic acid-binding, OB-fold
IPR018974 Tex-like protein, N-terminal
IPR022967 RNA-binding domain, S1
IPR027304 Trigger factor/SurA domain

PFAM

PF00575
PF09371

PRINTS

PIRSF

SMART

SM00732
SM00316

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite