Version 5.4
Mus musculus Protein: Tnrc6a
Summary
InnateDB Protein IDBP-209064.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tnrc6a
Protein Name trinucleotide repeat containing 6a
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000091595
InnateDB Gene IDBG-209062 (Tnrc6a)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 20 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0032947 protein complex scaffold
GO:0044822 poly(A) RNA binding
Biological Process
GO:0009267 cellular response to starvation
GO:0032507 maintenance of protein location in cell
GO:0035278 negative regulation of translation involved in gene silencing by miRNA
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0035068 micro-ribonucleoprotein complex
GO:0048471 perinuclear region of cytoplasm
Protein Structure and Domains
PDB ID MGI:2385292
InterPro IPR009060 UBA-like
IPR019486 Argonaute hook domain
PFAM PF10427
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q8BXM6
UniProt Splice Variant
Entrez Gene 233833
UniGene Mm.409337
RefSeq NP_659174
MGI ID
MGI Symbol Tnrc6a
OMIM
CCDS CCDS57583
HPRD
IMGT
EMBL AC138364 AC141887 AK044679 AK050601 AK142808 AK142809
GenPept BAC32030 BAC34334 BAE25197 BAE25198

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca