InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Ccdc47

Summary

InnateDB Protein

IDBP-213391.7

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Ccdc47

Protein Name

coiled-coil domain containing 47

Synonyms

2610204L23Rik; asp4; C88307; calumin;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000002043

InnateDB Gene

IDBG-267873 (Ccdc47)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.

Experimentally validated
Total	4 [view]
Protein-Protein	4 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	24 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005509	calcium ion binding
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0001649	osteoblast differentiation
GO:0006983	ER overload response
GO:0009791	post-embryonic development
GO:0055074	calcium ion homeostasis

Cellular Component

GO:0005783	endoplasmic reticulum
GO:0016020	membrane
GO:0016021	integral component of membrane

Protein Structure and Domains

PDB ID

MGI:1914413

InterPro

IPR012879 Protein of unknown function DUF1682

PFAM

PF07946

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q9D024

PhosphoSite

PhosphoSite-Q9D024

TrEMBL

Q0VBU4

UniProt Splice Variant

Entrez Gene

67163

UniGene

Mm.409959

RefSeq

NP_080285

MGI ID

MGI Symbol

Ccdc47

OMIM

CCDS

CCDS25551

HPRD

IMGT

EMBL

AB040489 AK011882 AK078812 AK132273 AK162160 AL596331 BC120502 BC137681 CH466558

GenPept

AAI20503 AAI37682 BAB27896 BAB68502 BAC37406 BAE21073 BAE36760 CAM27020 EDL34277