Version 5.4
Mus musculus Protein: Zfml
Summary
InnateDB Protein IDBP-253034.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zfml
Protein Name zinc finger, matrin-like
Synonyms AI323587; mNP220; Np220; Znf638;
Species Mus musculus
Ensembl Protein ENSMUSP00000109466
InnateDB Gene IDBG-162022 (Zfml)
Protein Structure
UniProt Annotation
Function Early regulator of adipogenesis that works as a transcription cofactor of CEBPs, controlling the expression of PPARG and probably of other proadipogenic genes, such as SREBF1. Binds to cytidine clusters in double-stranded DNA. {ECO:0000269PubMed:21602272}.
Subcellular Localization Nucleus speckle {ECO:0000255PROSITE- ProRule:PRU00130, ECO:0000269PubMed:21602272}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0016607 nuclear speck
Protein Structure and Domains
PDB ID MGI:1203484
InterPro IPR000504 RNA recognition motif domain
IPR000690 Zinc finger, C2H2-type matrin
IPR003604 Zinc finger, U1-type
IPR015880 Zinc finger, C2H2-like
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
SM00451
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q61464
PhosphoSite PhosphoSite-Q61464
TrEMBL
UniProt Splice Variant
Entrez Gene 18139
UniGene Mm.398596
RefSeq NP_001159843
MGI ID
MGI Symbol Zfml
OMIM
CCDS CCDS51823
HPRD
IMGT
EMBL AK043029 BC076615 D83033
GenPept AAH76615 BAA11749 BAC31439

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca