Version 5.4
Mus musculus Protein: Rbms1
Summary
InnateDB Protein IDBP-255860.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rbms1
Protein Name RNA binding motif, single stranded interacting protein 1
Synonyms 2600014B10Rik; AI255215; MSSP-1; MSSP-2; MSSP-3; YC1;
Species Mus musculus
Ensembl Protein ENSMUSP00000108128
InnateDB Gene IDBG-173608 (Rbms1)
Protein Structure
UniProt Annotation
Function Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity Ubiquitous. Expressed in all tissues except testis. {ECO:0000269PubMed:10639566}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 25 interaction(s) predicted by orthology.
Predicted by orthology
Total 25 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
Biological Process
GO:0006260 DNA replication
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:1861774
InterPro IPR000504 RNA recognition motif domain
IPR002343 Paraneoplastic encephalomyelitis antigen
PFAM PF00076
PRINTS PR00961
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q91W59
PhosphoSite PhosphoSite-Q91W59
TrEMBL Q3TW38
UniProt Splice Variant
Entrez Gene 56878
UniGene Mm.482338
RefSeq
MGI ID
MGI Symbol Rbms1
OMIM
CCDS
HPRD
IMGT
EMBL AB026569 AB026582 AK135280 AK147109 AK159851 AK161102 AL928581 AL929012 BC016501 BC056609 BC057866
GenPept AAH16501 AAH56609 AAH57866 BAA77262 BAA77264 BAE22471 BAE27681 BAE35428 BAE36195 CAM20660 CAM25422

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca