InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Smarcc1

Summary

InnateDB Protein

IDBP-256969.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Smarcc1

Protein Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

Synonyms

AI115498; BAF155; Rsc8; SRG3;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000107597

InnateDB Gene

IDBG-201862 (Smarcc1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 43 experimentally validated interaction(s) in this database.
They are also associated with 98 interaction(s) predicted by orthology.

Experimentally validated
Total	43 [view]
Protein-Protein	40 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	2 [view]
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	98 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003677	DNA binding
GO:0003682	chromatin binding
GO:0005515	protein binding

Biological Process

GO:0006323	DNA packaging
GO:0008286	insulin receptor signaling pathway
GO:0009887	organ morphogenesis
GO:0045944	positive regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0005622	intracellular
GO:0005634	nucleus
GO:0016514	SWI/SNF complex

Protein Structure and Domains

PDB ID

MGI:1203524

InterPro

IPR000953 Chromo domain/shadow
IPR001357 BRCT domain
IPR007526 SWIRM domain
IPR009057 Homeodomain-like

PFAM

PF00533
PF12738
PF04433

PRINTS

PIRSF

SMART

SM00298
SM00292

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

Q3UZD0

UniProt Splice Variant

Entrez Gene

20588

UniGene

Mm.85410

RefSeq

MGI ID

MGI Symbol

Smarcc1

OMIM

CCDS

HPRD

IMGT

EMBL

AC159372 AK133922

GenPept

BAE21927