Version 5.4
Mus musculus Protein: Rpgrip1
Summary
InnateDB Protein IDBP-257762.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rpgrip1
Protein Name retinitis pigmentosa GTPase regulator interacting protein 1
Synonyms 0610005A07Rik; 4930401L23Rik; 4930505G06Rik; A930002K18Rik; AA415034; nmf247;
Species Mus musculus
Ensembl Protein ENSMUSP00000107230
InnateDB Gene IDBG-148844 (Rpgrip1)
Protein Structure
UniProt Annotation
Function Essential for RPGR function and is also required for normal disk morphogenesis. {ECO:0000269PubMed:12651948}.
Subcellular Localization Cell projection, cilium {ECO:0000269PubMed:12651948}. Note=Situated between the axonemal microtubules and the plasma membrane.
Disease Associations
Tissue Specificity Colocalizes with RGPR in the photoreceptor connecting cilium, a thin bridge linking the cell body and the light-sensing outer segment. {ECO:0000269PubMed:12140192, ECO:0000269PubMed:12651948}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007601 visual perception
GO:0042462 eye photoreceptor cell development
GO:0050896 response to stimulus
GO:0060041 retina development in camera-type eye
Cellular Component
GO:0005929 cilium
GO:0005930 axoneme
GO:0031513 nonmotile primary cilium
Protein Structure and Domains
PDB ID MGI:1932134
InterPro IPR000008 C2 domain
IPR021656 Protein of unknown function DUF3250
PFAM PF00168
PF11618
PRINTS PR00360
PIRSF
SMART SM00239
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9EPQ2
PhosphoSite PhosphoSite-Q9EPQ2
TrEMBL
UniProt Splice Variant
Entrez Gene 77945
UniGene Mm.487226
RefSeq NP_076368
MGI ID
MGI Symbol Rpgrip1
OMIM
CCDS CCDS36918
HPRD
IMGT
EMBL AK015037 AK015701 AK029955 AK039097 AY008297 BC016092
GenPept AAG22857 AAH16092 BAB29685 BAB29938 BAC26697 BAC30237

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca