InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Trim9

Summary

InnateDB Protein

IDBP-260093.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Trim9

Protein Name

tripartite motif-containing 9

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000106151

InnateDB Gene

IDBG-145901 (Trim9)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 22 interaction(s) predicted by orthology.

Experimentally validated
Total	2 [view]
Protein-Protein	2 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	22 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000149	SNARE binding
GO:0004842	ubiquitin-protein transferase activity
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0042803	protein homodimerization activity
GO:0046872	metal ion binding

Biological Process

GO:0016079	synaptic vesicle exocytosis
GO:0016567	protein ubiquitination
GO:0035544	negative regulation of SNARE complex assembly
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045955	negative regulation of calcium ion-dependent exocytosis

Cellular Component

GO:0005622	intracellular
GO:0005737	cytoplasm
GO:0005856	cytoskeleton
GO:0008021	synaptic vesicle
GO:0030425	dendrite

Protein Structure and Domains

PDB ID

MGI:2137354

InterPro

IPR000315 Zinc finger, B-box
IPR001841 Zinc finger, RING-type
IPR001870 B30.2/SPRY domain
IPR003649 B-box, C-terminal
IPR003877 SPla/RYanodine receptor SPRY
IPR003961 Fibronectin, type III
IPR008985 Concanavalin A-like lectin/glucanases superfamily
IPR011011 Zinc finger, FYVE/PHD-type
IPR018355 SPla/RYanodine receptor subgroup
IPR018957 Zinc finger, C3HC4 RING-type

PFAM