Version 5.4
Mus musculus Protein: Gabpb1
Summary
InnateDB Protein IDBP-260305.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gabpb1
Protein Name GA repeat binding protein, beta 1
Synonyms BABPB2; E4TF1; E4TF1-47; E4TF1-53; E4Tf1B; GABPB; GABPB-1; GABPB-2; GABPB1-1; GABPB1-2; NRF2B1; NRF2B2;
Species Mus musculus
Ensembl Protein ENSMUSP00000106054
InnateDB Gene IDBG-204159 (Gabpb1)
Protein Structure
UniProt Annotation
Function Transcription factor capable of interacting with purine rich repeats (GA repeats).
Subcellular Localization Nucleus.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 1 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044212 transcription regulatory region DNA binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:95611
InterPro IPR002110 Ankyrin repeat
IPR020683 Ankyrin repeat-containing domain
PFAM PF00023
PF13606
PF11929
PF12796
PRINTS PR01415
PIRSF
SMART SM00248
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q00420
PhosphoSite PhosphoSite-Q00420
TrEMBL Q3US22
UniProt Splice Variant
Entrez Gene 14391
UniGene Mm.474903
RefSeq NP_997552
MGI ID 1AWC
MGI Symbol Gabpb1
OMIM
CCDS CCDS16685
HPRD
IMGT
EMBL AK040722 AK052828 AK140222 AK140907 AL844555 BC013558 M74516 M74517
GenPept AAA53031 AAA53032 AAH13558 BAC30682 BAC35165 BAE24287 BAE24515 CAM18699 CAM18701

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca